Epigenomics

CHIPS A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data

We developed a Snakemake pipeline called CHIPS (CHromatin enrIchment ProcesSor) to streamline the processing of ChIP-seq, ATAC-seq, and …

Len Taing, Gali Bai, Clara Cousins, Paloma Cejas, Xintao Qiu, Zachary T. Herbert, Myles Brown, Clifford A. Meyer, X. Shirley Liu, Henry W. Long, Ming Tang

CHIPS A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data

CHIPS

CHIPS (CHromatin enrIchment ProceSsor) An analysis pipeline in snakemake to streamline the processing of ChIP-seq, ATAC-seq, and DNase-seq data

CHIPS